Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838942.1_cds_XP_016507148.1_20300
CDS Infomation

[gene=LOC107824853] [db_xref=GeneID:107824853] [protein=protein NLP7-like isoform X2] [protein_id=XP_016507148.1] [location=complement(join(8734..9194,9942..10169,10291..10833,10924..11023,11106..11153,11546..12030,12806..12998))] [gbkey=CDS]
Sequence

ATGCAAGGGATTGAGAAATCTCAGTTTCCTGTCAATGATGATGTTGTTTACGAAGTATAT
ACCTCGTCTGAGTTCAAGAATTATATGGGAGAATCACTATCCTGTTCAGAAGAACGTTCT
AATTTCCATTTGATGGTTTTCTGGAGCAATAATGAAACTGAATCTAACTTTACCAATAAT
CTTATAGAAACATCTGTAAAGCAAAAGATTAAAGCAGCACTTCAGAGAATAGAAACATCC
CAAGTAATTCTACTACAGTTTTGGGGGCTGGAAAAGATTGAAGGTAGGAACTTTTTAACA
ACTGCAGGACAACCATTTGGTCTTAGATATCTATATAAAGGACTGTGTTGGTATAGGAAG
CACTGTCAAGGTTATAAATATAGTGTTAATAATAAGGGTGAAAGTGGCGAACAAGGAACA
GAAAAAGTGCATCTTTTTGGTCCGCCTGCACGAGTTTTCCAGGAAAAATTGCCAGAATCA
AGTACTCATGTGGGATACTATACGAACGAAGAGTTCCCAATTAGGGATCATGCTGTCCGG
TGTGGTGTCCGGACATATTTGGCTCTGCCTGTGTTTGAACCTATTGGGAAAAAATGTGTT
GGTGTGATTGAACTTGTTACAGTTTGGAAAGGTGGCTACTTGACTTATGAAGTTGAAAAA
GTACTAAACGCGCTTGAGGGAGTAGATCTCAAATGTCCTAAATTATATCTCCAAAAAGGT
AGAAAAGTACAAGAAGGGAAACAAAGTGACAGGGAGGAAATCAAAAGGATGTTAAAAATC
GTGCGGGAAACACACAAGTTGCCATTCGTTCGAGTTTGGATTCCGTATGAGGAAATGGAT
GCTAATGACCATGTTTATGACGATTATTATTACGATGATATGCTATGTTTCCGGGACATT
TCTAAGTTACAACCTTTGCAGAAAGATCAGGGGGTTGTTGGGAAAGCATTTTTTTCTGGA
AAATTGTGCTATTGCGAGAACATAACTGAATTCAGCATAATTGAGTATCCATTGGTACAT
TATGCGCGCTGGTGTGGATTAACTAGTTCTTTTGCTATTTGTTTGAAAAATGGCGTTGAA
GTCTACATACTGGAGCTGTTTCTTCCCCCTGATAACGGAGATCCAGAAATCTTGCTCGGA
TCAATTTTGTCTACAATGGGACAACATTTTCAGAACTTCAAATTTGCTTCTGGTCAAGAA
CTAGGACATGATTCAAGTGTTCAAGTTATCAAAGCGTATTCAGATAAGAATGTGGATTAT
TTTCATATATGTCAAACTAGAGAAAGTCTGTTTATGCCAGAAGTCTTGTGCGATGAGGAG
AGGAGGAACTGGCTAATGAAAGGCAACGAAAATCACACCGAGAAAGAAGCTATATCTGAG
TGCACAATTCAAAACTCGGTGGATAATGGACAGCAACAAATTATGGTTCAGTCCGATGTC
TTAAATACTGATATACAAGTTATTTCAGAGAAGCAATGTGTCAGTGTTACTCATTTTCAG
AAAGAAAGCAGAACAAGAACTAAAGACACTGTAAACTATGATGATCTCAAACAACATTTT
AACAAAAACCTCTCTGATGCAGCTGAAAGCCTTCAGGTTAGTCGGTCTACACTGAAGCGA
TTATGCAGAAAATATGGTATTCGAAGGTGGCCATTATCAAAACGAAAGAAGACACTCGGC
GAGTCAGATTACCAGCCATTAAATATGCTTCCAAAGAAGAAGAAGGCAATAACTTCAGCA
ACTACTTCAACACATGAAAATCATGGGAATAGCAGCAGCAGCAGCATCACAGTAAAGGCT
ACATATGGAGATGATATGATGAAGTTTAAGCTGTACTCATTCTCAAGAAAAGAAGATTTG
GACAAGGAATTGGATAAAAGATTGCAGCTACCAATTGGAAAATTTAGAACAAAATATATG
GATGAAGATAATGATTATATATGGATTGCCTGTGATGACGATTTGCGCGATTGTTTTAAT
AATGCTCTATCATTAGGGAAGAATACAATCAAGATGCTGGTTTTACCAGCAGCCATCAAT
CATTCTCTGGAATTGTAA

Peptide Sequence

PEP ID

XP_016507148.1
PEP Infomation

PREDICTED: protein NLP7-like isoform X2 [Nicotiana tabacum]
Sequence

MQGIEKSQFPVNDDVVYEVYTSSEFKNYMGESLSCSEERSNFHLMVFWSNNETESNFTNN
LIETSVKQKIKAALQRIETSQVILLQFWGLEKIEGRNFLTTAGQPFGLRYLYKGLCWYRK
HCQGYKYSVNNKGESGEQGTEKVHLFGPPARVFQEKLPESSTHVGYYTNEEFPIRDHAVR
CGVRTYLALPVFEPIGKKCVGVIELVTVWKGGYLTYEVEKVLNALEGVDLKCPKLYLQKG
RKVQEGKQSDREEIKRMLKIVRETHKLPFVRVWIPYEEMDANDHVYDDYYYDDMLCFRDI
SKLQPLQKDQGVVGKAFFSGKLCYCENITEFSIIEYPLVHYARWCGLTSSFAICLKNGVE
VYILELFLPPDNGDPEILLGSILSTMGQHFQNFKFASGQELGHDSSVQVIKAYSDKNVDY
FHICQTRESLFMPEVLCDEERRNWLMKGNENHTEKEAISECTIQNSVDNGQQQIMVQSDV
LNTDIQVISEKQCVSVTHFQKESRTRTKDTVNYDDLKQHFNKNLSDAAESLQVSRSTLKR
LCRKYGIRRWPLSKRKKTLGESDYQPLNMLPKKKKAITSATTSTHENHGNSSSSSITVKA
TYGDDMMKFKLYSFSRKEDLDKELDKRLQLPIGKFRTKYMDEDNDYIWIACDDDLRDCFN
NALSLGKNTIKMLVLPAAINHSLEL

Transcript Sequence

Gene sequence data has not been registered.